Summarize edgeR analysis: diagnotic plots, dispersions plot, summary of the independent filtering, export results...
summarizeResults.edgeR(out.edgeR, group, counts, alpha = 0.05,
col = c("lightblue", "orange", "MediumVioletRed", "SpringGreen"))the result of run.edgeR()
factor vector of the condition from which each sample belongs
matrix of raw counts
significance threshold to apply to the adjusted p-values
colors for the plots
A list containing: (i) a list of data.frames from exportResults.edgeR() and (ii) a table summarizing the number of differentially expressed features