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SARTools (version 1.6.2)

volcanoPlot: Volcano plots

Description

Volcano plot for each comparison: -log10(adjusted P value) vs log2(FC) with one dot per feature (red dot for a differentially expressed feature, black dot otherwise)

Usage

volcanoPlot(complete, alpha = 0.05, outfile = TRUE)

Arguments

complete

A list of data.frame containing features results (from exportResults.DESeq2() or exportResults.edgeR())

alpha

cut-off to apply on each adjusted p-value

outfile

TRUE to export the figure in a png file

Value

A file named volcanoPlot.png in the figures directory containing one volcano plot per comparison