euclidean_distance

correlation_distance

<p>Passing <code>euclidean_distance()</code> and <code>correlation_distance()</code> to <code><a rd-options="=reduce_dimensionality" href="/link/reduce_dimensionality()?package=SCORPIUS&version=1.0.4.1&to=%3Dreduce_dimensionality" data-mini-rdoc="=reduce_dimensionality::reduce_dimensionality()">reduce_dimensionality()</a></code> is deprecated.
Instead simply pass <code>"euclidean"</code> or <code>"pearson"</code>, respectively.</p>

An accurate and easy tool for performing linear trajectory inference on
single cells using single-cell RNA sequencing data. In addition, SCORPIUS
provides functions for discovering the most important genes with respect to
the reconstructed trajectory, as well as nice visualisation tools.
Cannoodt et al. (2016) <doi:10.1101/079509>.

Robrecht Cannoodt

SCORPIUS

Inferring Developmental Chronologies from Single-Cell RNA
Sequencing Data

Wouter Saelens

euclidean_distance function

<p>Passing <code>euclidean_distance()</code> and <code>correlation_distance()</code> to <code><a rd-options='=reduce_dimensionality' href='reduce_dimensionality()'>reduce_dimensionality()</a></code> is deprecated.
Instead simply pass <code>"euclidean"</code> or <code>"pearson"</code>, respectively.</p>

euclidean_distance: Deprecated distance functions

Description

Usage

Arguments