makeVariantNames: Create interpretable splice variant names
Description
Create interpretable splice variant names
taking format GENE_EVENT_VARIANT/ORDER_TYPE.
GENE is based on geneName if available, and geneID otherwise.
EVENT and VARIANT enumerate events and variants for the same gene
and event, respectively. ORDER indicates the total number of
variants in the same event (e.g. 1/2 refers to the first out of two
splice variants in the event). TYPE is based on variantType.
Usage
makeVariantNames(variants)
Arguments
variants
SGVariants object
Value
Character vector with splice variant names