predictCandidatesInternal

junctions

<code>IRanges</code> of genomic regions with minimal read
coverage required for internal exon prediction

islands


Identify candidate internal exons based on previously identified
splice junctions and regions with sufficient read coverage.


internal

Predict splice junctions and exons from BAM files and obtain
compatible read counts and FPKMs. Identify splice events and
estimate relative usage of splice variants based on compatible
read counts at event boundaries.

predictCandidatesInternal: Identify candidate internal exons

Description

Usage

Arguments

Value