mergeTxFeatures

one or more <code>TxFeatures</code> objects, or a single
list of <code>TxFeatures</code> objects

Minimum number of samples a feature must be
observed in to be included

min_n_sample


Merge features, typically after feature prediction in multiple samples.


SGSeq is a software package for analyzing splice events from
RNA-seq data. Input data are sequence reads mapped to a reference
genome in BAM format. Genes are represented as a genome-wide
splice graph, which can be obtained from existing annotation or
can be predicted from the data. Splice events are identified
from the graph and are quantified locally using structurally
compatible reads at the start or end of each splice variant.
The package includes functions for splice event prediction,
quantification, visualization and interpretation.

mergeTxFeatures: Merge redundant features

Description

Usage

Arguments

Value

Details

Examples