match_wormstaxa

<a href="https://lifecycle.r-lib.org/articles/stages.html#deprecated"><img src="figures/lifecycle-deprecated.svg?package=SHARK4R&version=1.0.2" alt="[Deprecated]"></a>
This function has been deprecated. Users are encouraged to use <code>match_worms_taxa</code> instead.
matches latin name in data with WoRMS taxon list

internal

Provides functions to retrieve, process, analyze, and
quality-control marine physical, chemical, and biological data. The
main focus is on Swedish monitoring data available through the 'SHARK'
database <https://shark.smhi.se/en/>, with additional API support for 'Nordic
Microalgae' <https://nordicmicroalgae.org/>, 'Dyntaxa'
<https://artfakta.se/>, World Register of Marine Species ('WoRMS') <https://www.marinespecies.org>,
'AlgaeBase' <https://www.algaebase.org>, OBIS 'xylookup' web service
<https://iobis.github.io/xylookup/> and Intergovernmental Oceanographic Commission (IOC) -
UNESCO databases on harmful algae <https://www.marinespecies.org/hab/> and toxins
<https://toxins.hais.ioc-unesco.org/>.

Anders Torstensson

SHARK4R

Accessing and Validating Marine Environmental Data from 'SHARK'
and Related Databases

Markus Lindh

Mikael Hedblom

Bengt Karlson

SHARK 

SBDI 

match_wormstaxa function

<dl><dt>names</dt>
<dd>Vector of scientific names.</dd>
<dt>ask</dt>
<dd>Ask user in case of multiple matches.</dd></dl>

Arguments

<a href='https://lifecycle.r-lib.org/articles/stages.html#deprecated'><img src='figures/lifecycle-deprecated.svg' alt='[Deprecated]' /></a>
This function has been deprecated. Users are encouraged to use <code>match_worms_taxa</code> instead.
matches latin name in data with WoRMS taxon list

Taxon matching using WoRMS (http://www.marinespecies.org/) — match_wormstaxa

<dl>

<dt>names</dt>
<dd>Vector of scientific names.</dd>


<dt>ask</dt>
<dd>Ask user in case of multiple matches.</dd>

</dl>

match_wormstaxa: Taxon matching using WoRMS (http://www.marinespecies.org/)

Description

Usage

Value

Arguments

References