shark_read_zip

<a href="https://lifecycle.r-lib.org/articles/stages.html#deprecated"><img src="figures/lifecycle-deprecated.svg?package=SHARK4R&version=1.0.2" alt="[Deprecated]"></a>
This function is deprecated and has been replaced by <code>read_shark()</code>.

internal

Provides functions to retrieve, process, analyze, and
quality-control marine physical, chemical, and biological data. The
main focus is on Swedish monitoring data available through the 'SHARK'
database <https://shark.smhi.se/en/>, with additional API support for 'Nordic
Microalgae' <https://nordicmicroalgae.org/>, 'Dyntaxa'
<https://artfakta.se/>, World Register of Marine Species ('WoRMS') <https://www.marinespecies.org>,
'AlgaeBase' <https://www.algaebase.org>, OBIS 'xylookup' web service
<https://iobis.github.io/xylookup/> and Intergovernmental Oceanographic Commission (IOC) -
UNESCO databases on harmful algae <https://www.marinespecies.org/hab/> and toxins
<https://toxins.hais.ioc-unesco.org/>.

Anders Torstensson

SHARK4R

Accessing and Validating Marine Environmental Data from 'SHARK'
and Related Databases

Markus Lindh

Mikael Hedblom

Bengt Karlson

SHARK 

SBDI 

shark_read_zip function

<dl><dt>zipname</dt>
<dd>Path to the zip archive containing SHARK data (expects a file named <code>shark_data.txt</code> inside).</dd>
<dt>delimiters</dt>
<dd>Character. Specifies the delimiter used to separate values in the file.
Options are <code>"point-tab"</code> (tab-separated) or <code>"point-semi"</code> (semicolon-separated).
Default is <code>"point-tab"</code>.</dd>
<dt>encoding</dt>
<dd>Character. Specifies the text encoding of the file.
Options are <code>"cp1252"</code>, <code>"utf_8"</code>, <code>"utf_16"</code>, or <code>"latin_1"</code>.
Default is <code>"utf_8"</code>. If encoding mismatch is detected, the detected encoding is used.</dd></dl>

Arguments

<a href='https://lifecycle.r-lib.org/articles/stages.html#deprecated'><img src='figures/lifecycle-deprecated.svg' alt='[Deprecated]' /></a>
This function is deprecated and has been replaced by <code>read_shark()</code>.

Read zip archive and unzip tab delimited files downloaded from SHARK — shark_read_zip

<dl>

<dt>zipname</dt>
<dd>Path to the zip archive containing SHARK data (expects a file named <code>shark_data.txt</code> inside).</dd>


<dt>delimiters</dt>
<dd>Character. Specifies the delimiter used to separate values in the file.
Options are <code>"point-tab"</code> (tab-separated) or <code>"point-semi"</code> (semicolon-separated).
Default is <code>"point-tab"</code>.</dd>


<dt>encoding</dt>
<dd>Character. Specifies the text encoding of the file.
Options are <code>"cp1252"</code>, <code>"utf_8"</code>, <code>"utf_16"</code>, or <code>"latin_1"</code>.
Default is <code>"utf_8"</code>. If encoding mismatch is detected, the detected encoding is used.</dd>

</dl>

shark_read_zip: Read zip archive and unzip tab delimited files downloaded from SHARK

Description

Usage

Value

Arguments

Details