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SIMICO (version 0.2.0)

Set-Based Inference for Multiple Interval-Censored Outcomes

Description

Contains tests for association between a set of genetic variants and multiple correlated outcomes that are interval censored. Interval-censored data arises when the exact time of the onset of an outcome of interest is unknown but known to fall between two time points.

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Version

Install

install.packages('SIMICO')

Monthly Downloads

164

Version

0.2.0

License

GPL-3

Maintainer

Jaihee Choi

Last Published

November 25th, 2022

Functions in SIMICO (0.2.0)

haz_left

H_ik(L_ik)
Get_CausalSNPs_bynum

Get_CausalSNPs_bynum()
gamma_on

d^2/d_gamma_ldgamma_l
gammatheta_off

d^2/d_gamma_ldtheta_m
fd_term

d/d_theta_l
sd_on

d^2/dsigma^2^2
simico_out

Get P-Values
ss_sd

d^2/d_sigma^2^2
simico_fit_null

simico_fit_null()
simico_gen_dat

simico_gen_dat()
st_off

d^2/d_theta_ldsigma^2
surv_right

S_ik(R_ik)
without_one_phen

Survival Difference Product without Outcome l
sim_gmat

Simulate genetic matrix.
surv_diff

S_ik(L_ik) - S_ik(R_ik)
surv_left

S_ik(L_ik)
ss_fd

d/d_sigma^2
haz_right

H_ik(R_ik)
without_two_phen

Survival Difference Product without Outcomes l and m
sd_off

d^2/d_theta_kdsigma^2
gammatheta

d^2/d_gamma_kdtheta_k
gamma_fd

d/d_gamma_l
get_A

Get A vector
gamma_off

d^2/d_gamma_ldgamma_m
gammasigma

d^2/d_gamma_ldsigma^2