SIPmg (version 3.0)

filter_na: Remove MAGs with NAs from atomX table

Description

This function enables removing NAs from the atomX table.

Usage

filter_na(atomX)

Value

A list of 2 data.frame objects without MAGs which have NAs. 'W' contains the weighted mean buoyant density (W) values for each OTU in each treatment/control. 'A' contains the atom fraction excess values for each OTU. For the 'A' table, the 'Z' column is buoyant density shift, and the 'A' column is atom fraction excess.

Arguments

atomX

A list object created by qSIP_atom_excess_MAGs()

Examples

data(atomX)

# \donttest{

### Remove NAs in atomX table
atomx_no_na = filter_na(atomX)
# }