SLGI (version 1.32.0)

domainDist: Finds the number of gene sets for each shared domain

Description

domainDist takes a list of shared domains, and compute for each distinct domain how many gene sets share it.

Usage

domainDist(domainL)

Arguments

domainL

Each element of the list is a vector of functional domains.

Value

Returns a frequency table with descending order.

Details

For each domain that appears in the domain list, domainDist counts the number of elements that have this domain.

See Also

getSharedDomains, sharedBy

Examples

data(AtongFnDomain)
domainDist(AtongFnDomain$SharedPfam[1:20])