SLGI (version 1.32.0)

getSharedDomains: Find domains shared by a given list of gene names.

Description

getSharedDomains finds domains in the provided environment that are shared by a list of genes.

Usage

getSharedDomains(geneNameV, env)

Arguments

geneNameV

Character vector of gene names.

env

R object that provides mappings between an entrez gene identifier and the associated Pfam identifiers.

Value

getSharedDomains returns a vector of the names of the shared domains.

See Also

domainDist, sharedBy

Examples

library("org.Sc.sgd.db")
getSharedDomains(c("YEL003W","YLR200W"),  org.Sc.sgdPFAM)