SLGI (version 1.32.0)

siResult-class: A class for representing the result of the SLGI graph permutation model.

Description

A class for representing the result of the modelSLGI function.

Slots

Observed:

Return a "numeric" vector: the observed number of synthetic genetic interactions between components of one or two cellular organizational units

Expected:

Return a matrix: the expected number of synthetic genetic interactions between components of one or two cellular organizational units

Methods

plot

Graphical representation of the permutation model result

compare

Summarizes the result of the modelSLGI function

See Also

modelSLGI,plot

Examples

## apply a permutation model 
 data(ScISIC)
 data(Atong)
 data(SGA)
 model <-  modelSLGI(Atong, universe= SGA, interactome=ScISIC,
  type="intM", perm=2)

model