SLGI (version 1.32.0)

topInteraction: Extract interacting biological complexes

Description

Extract the top X interacting biological complexes.

Usage

topInteraction(data,top=10)

Arguments

data

Square matrix of biological complexes that shares one or more genes(proteins)

top

Interger that represents the percentage of interacting complexe

Value

Data frame of biological complexes that interact. The first two columns are the cellular organizational units names and the third column indicates the number of interactions.

Examples

data(Atong)
data(ScISIC)
data(SGA)
SLa2 <- gi2Interactome(Atong, ScISIC)
## Search for synthetic lethal interaction
compM <- getInteraction(SLa2, SGA, ScISIC)
top10Interaction<- topInteraction(compM$bwMat,top=10)