SMITIDstruct (version 0.0.5)

SMITIDstruct-package: Data Structure and Manipulation Tool for Host and Viral Population

Description

Statistical Methods for Inferring Transmissions of Infectious Diseases from deep sequencing data (SMITID). It allow sequence-space-time host and viral population data storage, indexation and querying.

Details

Package:	SMITIDstruct
Type:	Package
Version:	0.0.5
Date:	2019-06-14
License:	GPL (>=2)

The SMITIDstruct package contains functions and methods for manipulating Host and Viral population genotico-space-time data.

See Also

demo.SMITIDstruct.run

Examples

# NOT RUN {
## Run a simulation
library("SMITIDstruct")
demo.SMITIDstruct.run() 
# }
# NOT RUN {
# }