annotate_shiny

This function should not be used outside shiny app
A list of variants and parameters are received and their information is checked on various API servers.

To automated functional annotation of genetic variants and linked proxies. Linked SNPs in moderate to high linkage disequilibrium (e.g. r2>0.50) with the corresponding index SNPs will be selected for further analysis.

Alireza Ani

SNPannotator

Automated Functional Annotation of Genetic Variants and Linked
Proxies

Zoha Kamali

Ahmad Vaez

annotate_shiny function

<dl><dt>config.list</dt>
<dd>List. A list of variants andconfiguration parameters.</dd></dl>

Arguments

Run the annotation pipeline on a list of variants from shiny app — annotate_shiny

<dl>

<dt>config.list</dt>
<dd>List. A list of variants andconfiguration parameters.</dd>

</dl>

annotate_shiny: Run the annotation pipeline on a list of variants from shiny app

Description

Usage

Value

Arguments