SNPassoc (version 1.0-2)

intervals: Print ORs and 95% confidence intervals for an object of class 'haplo.glm'

Description

Print ORs and confidence intervals for an object of class 'haplo.glm'

Usage

intervals(o, level=.95, ...)
intervals.haplo.glm(o, level=.95, sign = 1, FUN=exp, ...)
print.intervals(x, len = 6, d = 2, exclude.intercept=TRUE, pval=TRUE, ...)
summary.haplo.glm(object, ...)

Arguments

o

object of class 'haplo.glm'

x

object of class 'haplo.glm'

object

object of class 'haplo.glm'

level

significance level. Default is 95 percent

sign

sign

FUN

len

length

d

number of decimals

exclude.intercept

is the intercept excluded?

pval

is p value printed?

...

other arguments

Examples

# Not Run
# data(SNPs)
# tag.SNPs<-c("snp100019","snp10001","snp100029")
# geno<-make.geno(SNPs,tag.SNPs)

# mod<-haplo.glm(casco~geno,data=SNPs, 
#      family=binomial,
#	locus.label=tag.SNPs,
#	allele.lev=attributes(geno)$unique.alleles,
#	control = haplo.glm.control(haplo.freq.min=0.05))

# intervals(mod)
# summary(mod)