SQMtools (version 1.6.3)

combineSQMlite: Combine several SQM or SQMlite objects

Description

Combine an arbitrary number of SQM or SQMlite objects into a single SQMlite object. This function accepts objects originating from different projects (i.e. different SqueezeMeta runs).

Usage

combineSQMlite(...)

Value

A SQMlite object

Arguments

...

an arbitrary number of SQM or SQMlite objects. Alternatively, a single list containing an arbitrary number of SQMlite objects.

See Also

combineSQM

Examples

if (FALSE) {
data(Hadza)
# Load data coming from a different run
other = loadSQMlite("/path/to/other/project/tables") # e.g. if the project was run using sqm_reads
# (We could also use loadSQM to load the data as long as the data comes from a SqueezeMeta run)
combined = combineSQMlite(Hadza, other)
# Now we can plot together the samples from Hadza and the second project
plotTaxonomy(combined, 'family')
}