get_metrics_pd

Extracted summarized metrics for reference data and synthetic data

An independent, reproducible, and flexible Spatially Resolved Transcriptomics (SRT) simulation framework that can be used to facilitate the development of SRT analytical methods for a wide variety of SRT-specific analyses. It utilizes spatial localization information to simulate SRT expression count data in a reproducible and scalable fashion. Two major simulation schemes are implemented in 'SRTsim': reference-based and reference-free.

Jiaqiang Zhu

SRTsim

Simulator for Spatially Resolved Transcriptomics

Lulu Shang

Xiang Zhou

get_metrics_pd function

<dl><dt>simsrt</dt>
<dd>A SRTsim object</dd>
<dt>metric</dt>
<dd>Specification of metrics to be plotted.</dd></dl>

Arguments

Extracted summarized metrics for reference data and synthetic data — get_metrics_pd

<dl>

<dt>simsrt</dt>
<dd>A SRTsim object</dd>


<dt>metric</dt>
<dd>Specification of metrics to be plotted.</dd>

</dl>

get_metrics_pd: Extracted summarized metrics for reference data and synthetic data

Description

Usage

Value

Arguments