STRINGdb (version 1.12.0)

get_homologs: get_homologs

Description

Returns the homologs of the given input identifiers that are present in the given target_species_id.

Usage

"get_homologs"(string_ids, target_species_id, bitscore_threshold=NULL)

Arguments

string_ids

a vector of STRING identifiers.

target_species_id

NCBI taxonomy identifier of the species to query for homologs (the species must be present in the STRING database)

bitscore_threshold

threshold on the bitscore of the blast alignment.

Value

Data frame containing the homologs of the given input identifiers and that are present in the given target_species_id.