\S4method{load_all}{STRINGdb}


Force download and loading of all the files (so that you can later store the object on the hard disk if you like).
It makes use of the variables:
"backgroundV"       vector containing STRING identifiers to be used as background 
                    (i.e. the STRING network loaded will contain only the proteins that are present also in this vector)
"score_threshold"   STRING combined score threshold (the network loaded contains only interactions having a combined score greater than this threshold)


load_all

The STRINGdb package provides a R interface to the STRING protein-protein interactions database (http://www.string-db.org).

Alexander Roth

STRINGdb

STRINGdb (Search Tool for the Retrieval of Interacting proteins database)

load_all function

Force download and loading of all the files (so that you can later store the object on the hard disk if you like).
It makes use of the variables:
"backgroundV"       vector containing STRING identifiers to be used as background 
                    (i.e. the STRING network loaded will contain only the proteins that are present also in this vector)
"score_threshold"   STRING combined score threshold (the network loaded contains only interactions having a combined score greater than this threshold)

load_all: load_all

Description

Usage

Arguments