\S4method{set_background}{STRINGdb}

background_vector


With this method you can specify a vector of proteins to be used as background. 
The network is reloaded and only the proteins that are present in the background vector are inserted in the graph.  
Besides, the background is taken in consideration for all the enrichment statistics.


set_background

The STRINGdb package provides a R interface to the STRING protein-protein interactions database (http://www.string-db.org).

Alexander Roth

STRINGdb

STRINGdb (Search Tool for the Retrieval of Interacting proteins database)

set_background function

With this method you can specify a vector of proteins to be used as background. 
The network is reloaded and only the proteins that are present in the background vector are inserted in the graph.  
Besides, the background is taken in consideration for all the enrichment statistics.

set_background: set_background

Description

Usage

Arguments