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SVAlignR (version 0.9.2)

Recovering Structure of Long Molecules from Structural Variation Data

Description

Implements a method to combine multiple levels of multiple sequence alignment to uncover the structure of complex DNA rearrangements.

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Install

install.packages('SVAlignR')

Monthly Downloads

115

Version

0.9.2

License

Apache License (== 2.0)

Maintainer

Kevin Coombes

Last Published

September 24th, 2025

Functions in SVAlignR (0.9.2)

Breakpoints-class

Class "Breakpoints"
DeBruijn-class

Class "DeBruijn"
Words

Class "Words"
Cipher-class

Class "Cipher"
SVAlignR-data

SVAlignR Sample Data
SequenceCluster-class

Class "SequenceCluster"
StringGraph-class

Class "StringGraph"
AlignedCluster-class

Class "AlignedCluster"