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SWMPr (version 2.1.5)

Retrieving, Organizing, and Analyzing Estuary Monitoring Data

Description

Tools for retrieving, organizing, and analyzing environmental data from the System Wide Monitoring Program of the National Estuarine Research Reserve System. These tools address common challenges associated with continuous time series data for environmental decision making.

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Version

Install

install.packages('SWMPr')

Monthly Downloads

608

Version

2.1.5

License

CC0

Maintainer

Marcus W Beck

Last Published

March 28th, 2016

Functions in SWMPr (2.1.5)

Get colors for plots

Import local CDMO data

Subset a swmpr object

Example water quality data for Apalachicola Bay Dry Bar station.

Parse web results for swmpr

Plot multiple SWMP time series on the same y-axis

Simple trend decomposition of monthly swmpr data

Plot swmpr data

Plot ecosystem metabolism for a swmpr object

Create a swmpr object

Example nutrient data for Apalachicola Bay Cat Point station.

all_params_dtrng

Get CDMO records within a date range

Get parameters of a given type

Example water quality data for Apalachicola Bay Cat Point station.

Calculate oxygen mass transfer coefficient

Aggregate metabolism data

Aggregate swmpr data

Simple trend decomposition

Identify metabolic days in a swmpr time series

Remove replicates in nutrient data

Locations of NERRS sites

Combine swmpr data

Get CDMO records for a single parameter

Ecosystem metabolism

Import current station records from the CDMO

Summary of QAQC flags in SWMP data

QAQC filtering for SWMP data

na.approx.swmpr

Linearly interpolate gaps

Obtain metadata for all stations

Format SWMP datetimestamp

Smooth swmpr data

Example weather data for Apalachicola Bay East Bay station.

Obtain metadata for a single reserve

Format a swmpr time vector

Plot graphical summaries of SWMP data

Plot swmpr using a histogram