parseProgenesisPeptideMeasurementCsv: Parse Progenesis Peptide Measurement Csv Export
Description
Parse Progenesis Peptide Measurement Csv Export
Usage
parseProgenesisPeptideMeasurementCsv(file, expDesign = expDesign, method = "auc", expressionColIndices = .getProgenesisCsvExpressionColIndices(file, method = method), uniqueProteins = F)
Arguments
file
path to Progenesis Peptide Measurement csv file
expDesign
experimental design data.frame
method
auc (area under curve) or spc (spectral count)
expressionColIndices
default .getProgenesisCsvExpressionColIndices()
uniqueProteins
T/F keep unique peptides only
Value
ExpressionSet object
