getIntSumPerProtein: Sum up raw intensities per protein and channel. keep track of number of summed spectra and unique peptides
Description
Sum up raw intensities per protein and channel. keep track of number of summed spectra and unique peptides
Usage
getIntSumPerProtein(intData, proteinACs, peptides, minNbPeptPerProt = 1)
Arguments
intData
data.frame of intensities per channel
proteinACs
vector of protein accession numbers
peptides
vector of peptide sequneces
minNbPeptPerProt
minimal number of peptides per protein
Value
list containing 3 objects 1) data.frame of channel intensities per protein ac, 2) vector listing number of summed spectra per protein, 3) vector listing number of summed peptides per protein