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Splits object based on a single attribute into a list of subsetted objects, one for each level of the attribute. For example, useful for taking an object that contains cells from many patients, and subdividing it into patient-specific objects.
SplitObject(object, attribute.1 = "ident", ...)Seurat object
Attribute for splitting. Default is "ident". Currently only supported for class-level (i.e. non-quantitative) attributes.
Additional parameters to pass to SubsetData
A named list of Seurat objects, each containing a subset of cells from the original object.
# NOT RUN {
# Assign the test object a three level attribute
groups <- sample(c("group1", "group2", "group3"), size = 80, replace = TRUE)
names(groups) <- pbmc_small@cell.names
pbmc_small <- AddMetaData(object = pbmc_small, metadata = groups, col.name = "group")
obj.list <- SplitObject(pbmc_small, attribute.1 = "group")
# }
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