setThreads

Set the number of threads to use for parallel processing in Seurat

A toolkit for quality control, analysis, and exploration of single cell RNA sequencing data. 'Seurat' aims to enable users to identify and interpret sources of heterogeneity from single cell transcriptomic measurements, and to integrate diverse types of single cell data. See Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>, Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>, Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031>, Hao, Hao, et al (2020) <doi:10.1101/2020.10.12.335331>, Jiang, et al (2026) for more details.

Paul Hoffman

Seurat

Tools for Single Cell Genomics

Andrew Butler

Saket Choudhary

David Collins

Charlotte Darby

Jeff Farrell

Isabella Grabski

Christoph Hafemeister

Yuhan Hao

Austin Hartman

Jaison Jain

Longda Jiang

Madeline Kowalski

Skylar Li

Gesmira Molla

Efthymia Papalexi

Patrick Roelli

Rahul Satija

Karthik Shekhar

Anagha Shenoy

Avi Srivastava

Tim Stuart

Kristof Torkenczy

Brian Zhang

Shiwei Zheng

Satija Lab and Collaborators 

setThreads function

<dl><dt>n</dt>
<dd>Number of threads (&gt;= 1) to use for processing. If NULL, will be set to (available cores / 2).</dd>
<dt>verbose</dt>
<dd>Whether to print the number of threads set and available cores to the console</dd></dl>

Arguments

Set the number of threads to use for parallel processing in Seurat — setThreads

<dl>

<dt>n</dt>
<dd>Number of threads (&gt;= 1) to use for processing. If NULL, will be set to (available cores / 2).</dd>


<dt>verbose</dt>
<dd>Whether to print the number of threads set and available cores to the console</dd>

</dl>

Set the number of threads to use for parallel processing in Seurat

setThreads: Set the number of threads to use for parallel processing in Seurat

Description

Usage

Arguments

Details

See Also