EstNull

EstNull
This function is a Rcpp version of Wenguang Sun and Tony T. Cai's
EstNull.func R function, estimating null distribution from data.
Sun, W., &amp; Cai, T. T. (2007). Oracle and Adaptive Compound Decision
Rules for False Discovery Rate Control.
Journal of the American Statistical Association,
102(479), 901–912.

Cluster-independent method based on topology structure of gene co-expression network for identifying feature gene sets, extracting cellular subpopulations, and elucidating intrinsic relationships among these subpopulations. Without prior cell clustering, SifiNet circumvents potential inaccuracies in clustering that may influence subsequent analyses. This method is introduced in Qi Gao, Zhicheng Ji, Liuyang Wang, Kouros Owzar, Qi-Jing Li, Cliburn Chan, Jichun Xie "SifiNet: a robust and accurate method to identify feature gene sets and annotate cells" (2024) <doi:10.1093/nar/gkae307>.

Qi Gao

SiFINeT

Single Cell Feature Identification with Network Topology

EstNull function

<dl><dt>x</dt>
<dd>Input vector of all coexpression values</dd>
<dt>gamma</dt>
<dd>Parameter setting the stopping threshold</dd></dl>

Arguments

Author

EstNull
This function is a Rcpp version of Wenguang Sun and Tony T. Cai's
EstNull.func R function, estimating null distribution from data.
Sun, W., &amp; Cai, T. T. (2007). Oracle and Adaptive Compound Decision
Rules for False Discovery Rate Control.
Journal of the American Statistical Association,
102(479), 901–912. — EstNull

<dl>

<dt>x</dt>
<dd>Input vector of all coexpression values</dd>


<dt>gamma</dt>
<dd>Parameter setting the stopping threshold</dd>

</dl>

EstNull
This function is a Rcpp version of Wenguang Sun and Tony T. Cai's
EstNull.func R function, estimating null distribution from data.
Sun, W., &amp; Cai, T. T. (2007). Oracle and Adaptive Compound Decision
Rules for False Discovery Rate Control.
Journal of the American Statistical Association,
102(479), 901–912.

Description

Usage

Value

Arguments

Author