Signac (version 1.6.0)

FractionCountsInRegion: Fraction of counts in a genomic region

Description

Find the fraction of counts per cell that overlap a given set of genomic ranges

Usage

FractionCountsInRegion(object, regions, assay = NULL, ...)

Arguments

object

A Seurat object

regions

A GRanges object containing a set of genomic regions

assay

Name of assay to use

...

Additional arguments passed to CountsInRegion

Value

Returns a numeric vector

Examples

# NOT RUN {
FractionCountsInRegion(
  object = atac_small,
  assay = 'bins',
  regions = blacklist_hg19
)
# }