term_marginals

Calculate marginal probability of terms inclusion in <code>phi</code>

Similarity regression,
evaluating the probability of association between sets of ontological terms
and binary response vector. A no-association model is compared with one in which
the log odds of a true response is linked to the semantic similarity
between terms and a latent characteristic ontological profile - 'Phenotype Similarity Regression for Identifying the Genetic Determinants of Rare Diseases', Greene et al 2016 <doi:10.1016/j.ajhg.2016.01.008>.

Daniel Greene

SimReg

Similarity Regression

term_marginals function

<dl><dt>...</dt>
<dd>Arguments to pass to <code>sim_reg</code>.</dd></dl>

Arguments

Calculate marginal probability of terms inclusion in phi — term_marginals

<dl>

<dt>...</dt>
<dd>Arguments to pass to <code>sim_reg</code>.</dd>

</dl>

term_marginals: Calculate marginal probability of terms inclusion in `phi`

Description

Usage

Value

Arguments