SkeletalVis (version 0.1.2)

get_comparisons: Retrieve metadata for the SkeletalVis database

Description

`get_comparisons`Retieves the metadata file containing accession and comparison information for the skeletalvis database.

Usage

get_comparisons(skeletalvis, accession = NULL)

Value

A dataframe containing metadata.

Arguments

skeletalvis

The path to the SkeletalVis data folder.

accession

Optionally an experiment accession number for the experiment of interest to filter the metadata by.

Examples

# Get the path to the directory with the accessions.txt file
skeletalvis_path <- load_skeletalvis(demo=TRUE)

# Retrieve the metadata
metadata <- get_comparisons(skeletalvis_path)

# View the metadata
head(metadata)

metadata <- get_comparisons(skeletalvis_path, "GSE85761")