SnapATAC (version 1.0.0)

rowMeans: rowMeans for snap objects

Description

This function takes a snap object and returns the row means of its count matrix.

Usage

# S4 method for snap
rowMeans(x, mat = c("bmat", "pmat", "gmat"), na.rm = TRUE)

Arguments

x

A snap object

mat

A charater object indicates what matrix slot to use for calculation

na.rm

A logical variable indicates wether to remove NA in the matrix

Examples

# NOT RUN {
data(demo.sp);
a = rowMeans(demo.sp, mat="bmat");
b = rowMeans(demo.sp, mat="pmat");
d = rowMeans(demo.sp, mat="gmat");

# }