Model_by_PoolNames

Constructor for <code>Model_by_PoolNames</code>

Functions for modeling Soil Organic Matter decomposition
in terrestrial ecosystems with linear and nonlinear systems of differential equations.
The package implements
models according to the compartmental system representation described in
Sierra and others (2012) <doi:10.5194/gmd-5-1045-2012> and Sierra and others (2014)
<doi:10.5194/gmd-7-1919-2014>.

Carlos Sierra

SoilR

Models of Soil Organic Matter Decomposition

Model_by_PoolNames function

<dl><dt>smod</dt>
<dd>see methods</dd>
<dt>times</dt>
<dd>a vector of times</dd>
<dt>mat</dt>
<dd>a compartmental matrix</dd>
<dt>initialValues</dt>
<dd>a vector of initial values</dd>
<dt>inputFluxes</dt>
<dd>a vector of input fluxes</dd>
<dt>internal_fluxes</dt>
<dd>flux rate among pools</dd>
<dt>out_fluxes</dt>
<dd>flux rates out of pools</dd>
<dt>timeSymbol</dt>
<dd>character symbol used to represent time</dd>
<dt>solverfunc</dt>
<dd>function used to solve system of ODEs</dd></dl>

Arguments

Constructor for Model_by_PoolNames — Model_by_PoolNames

<dl>

<dt>smod</dt>
<dd>see methods</dd>


<dt>times</dt>
<dd>a vector of times</dd>


<dt>mat</dt>
<dd>a compartmental matrix</dd>


<dt>initialValues</dt>
<dd>a vector of initial values</dd>


<dt>inputFluxes</dt>
<dd>a vector of input fluxes</dd>


<dt>internal_fluxes</dt>
<dd>flux rate among pools</dd>


<dt>out_fluxes</dt>
<dd>flux rates out of pools</dd>


<dt>timeSymbol</dt>
<dd>character symbol used to represent time</dd>


<dt>solverfunc</dt>
<dd>function used to solve system of ODEs</dd>

</dl>

Model_by_PoolNames: Constructor for `Model_by_PoolNames`

Description

Usage

Value

Arguments