SpatialEpi v1.1

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by Albert Kim

Performs various spatial epidemiological analyses

Cluster Detection, Disease Mapping

Name	Description
estimate.lambda	Internal Function to Estimate Lambda
LogNormalPriorCh	Compute Parameters to Calibrate a Log-normal Distribution
circle	Compute cartesian coordinates of a cluster center and radius
process.MCMC.chain	Process MCMC Chain
pennLC	Pennsylvania Lung Cancer
create.geo.objects	Create geographical objects to be used in bayes.cluster function.
expected	Compute Expected Numbers of Disease
ranking	Get rankings of non-overlapping elements
SpatialEpi-package	Methods for spatial epidemiology
latlong2grid	Convert Coordinates from Latitude/Longitude to Grid
normalize	Normalize a vector
estimate.q	Estimate q values for prior prob of j clusters/anti-clusters
plotmap	Plot Levels of a Variable in a Colour-Coded Map
MCMC	MCMC Wrapper Function
eBayes	Empirical Bayes Estimates of Relative Risk
grid2latlong	Convert Coordinates from Grid to Latitude/Longitude
bayes.cluster	Bayesian Cluster Detection
zones	Create Set of All Zones and Output Geographical Information
besag.newell	Besag-Newell Cluster Detection Method
polygon2spatial.polygon	Convert a Polygon to a Spatial Polygons Object
mapvariable	Plot Levels of a Variable in a Colour-Coded Map
NYleukemia	Upstate New York Leukemia Data
scotland	Lip Cancer in Scotland
GammaPriorCh	Compute Parameters to Calibrate a Gamma Distribution
kulldorff	Kulldorff Cluster Detection Method
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depends	boot , foreign , gtools , lattice , maps , maptools , MASS , Matrix , nlme , rgeos , shapefiles , sp , spdep
Contributors	Albert Kim, Cici Chen, Michelle Ross, Jon Wakefield, E. Venkatraman