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SubgrPlots (version 0.1.2)

Graphical Displays for Subgroup Analysis in Clinical Trials

Description

Provides functions for obtaining a variety of graphical displays that may be useful in the subgroup analysis setting. An example with a prostate cancer dataset is provided. The graphical techniques considered include level plots, mosaic plots, contour plots, bar charts, Venn diagrams, tree plots, forest plots, Galbraith plots, L'Abb plots, the subpopulation treatment effect pattern plot, alluvial plots, circle plots and UpSet plots.

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Version

Install

install.packages('SubgrPlots')

Monthly Downloads

28

Version

0.1.2

License

MIT + file LICENSE

Maintainer

Nicolas Ballarini

Last Published

January 13th, 2020

Functions in SubgrPlots (0.1.2)

plot_nightingale_effect

Nightingale plot with treatment effects
plot_network

network overlap plot (only works for binary variables)
plot_alluvial

Alluvial plot
plot_nightingale

Nightingale plot
plot_mosaic

Mosaic plot
plot_matrix_overlap

matrix plots for relative overlap proportions of pairwise subgroups
plot_dissimilarity_alternative

An alternative plot for displaying dissimilarity distances of subgroups
plot_overlap2

a graphical display for showing relative proportions of pairwise subgroup overlap with two unidirectional arrowed curved lines around a circle
plot_forest

Forest plot for subgroup effect size
plot_overlap_alternative

a graphical display for showing relative proportions of pairwise subgroup overlap with two unidirectional arrowed lines around two circle
plot_overlap

A graphical display for showing relative proportions of pairwise subgroup overlap with two unidirectional arrowed curved lines around a circle
plot_labbe

L'Abbe plot for subgroup effect size
plot_venn

Venn diagram for subgroup effect size
prca

Prostate Cancer Dataset
plot_stepp

STEPP for subgroup effect size
plot_level

Level plot for subgroup effect size
subgroupset

UpSetR Plot with treatment effects
plot_tree

Tree plot for subgroup effect size
plot_radial2

Modified Radial (Galbraith) plot for subgroup effect size
plot_radial

Radial (Galbraith) plot for subgroup effect size
ggplot_radial2

Modified Radial (Galbraith) plot for subgroup effect size
plot_barchart

Barchart for subgroup effect size
plot_dissimilarity

a plot for displaying dissimilarity distances of subgroups
plot_contour

Contour plot for subgroup effect size
plot_contour_localreg

Contour plot for effect size via local regression.
plot_circle2

Circular plot using circlize package with matrix layout.
ggplot_stepp

STEPP for subgroup effect size
ggplot_radial

Radial (Galbraith) plot for subgroup effect size
plot_circle

Circular plot using circlize package