pred.seqlr

Assign positive and negative groups based on predict.rule, the output of seqlr.batting.

Implementation of Sequential BATTing (bootstrapping and aggregating of thresholds from trees) for developing threshold-based multivariate (prognostic/predictive) biomarker signatures. Variable selection is automatically built-in. Final signatures are returned with interaction plots for predictive signatures. Cross-validation performance evaluation and testing dataset results are also output. Detail algorithms are described in Huang et al (2017) <doi:10.1002/sim.7236>.

Xin Huang

SubgrpID

Patient Subgroup Identification for Clinical Drug Development

Yan Sun

Saptarshi Chatterjee

Paul Trow

pred.seqlr function

<dl><dt>x</dt>
<dd>input predictors matrix</dd>
<dt>predict.rule</dt>
<dd>Prediction rule returned by seqlr.batting.</dd></dl>

Arguments

pred.seqlr — pred.seqlr

<dl>

<dt>x</dt>
<dd>input predictors matrix</dd>


<dt>predict.rule</dt>
<dd>Prediction rule returned by seqlr.batting.</dd>

</dl>

pred.seqlr: pred.seqlr

Description

Usage

Value

Arguments

Details