summarize.cv.stats

Calculate summary statistics from raw statistics returned by evaluate.cv.results.

Implementation of Sequential BATTing (bootstrapping and aggregating of thresholds from trees) for developing threshold-based multivariate (prognostic/predictive) biomarker signatures. Variable selection is automatically built-in. Final signatures are returned with interaction plots for predictive signatures. Cross-validation performance evaluation and testing dataset results are also output. Detail algorithms are described in Huang et al (2017) <doi:10.1002/sim.7236>.

Xin Huang

SubgrpID

Patient Subgroup Identification for Clinical Drug Development

Yan Sun

Saptarshi Chatterjee

Paul Trow

summarize.cv.stats function

<dl><dt>raw.stats</dt>
<dd>raw statistics from evaluate.cv.results</dd>
<dt>trtvar</dt>
<dd>treatment variable name</dd>
<dt>type</dt>
<dd>data type - "c" - continuous , "b" - binary, "s" - time to event - default = "c"</dd></dl>

Arguments

summarize.cv.stats — summarize.cv.stats

<dl>

<dt>raw.stats</dt>
<dd>raw statistics from evaluate.cv.results</dd>


<dt>trtvar</dt>
<dd>treatment variable name</dd>


<dt>type</dt>
<dd>data type - "c" - continuous , "b" - binary, "s" - time to event - default = "c"</dd>

</dl>

summarize.cv.stats: summarize.cv.stats

Description

Usage

Value

Arguments

Details