isPackageLoaded

A string. The name of the R package which determines whether it is loaded.

name

Determine if the package is loaded. If the package is not loaded,
the program will prompt the user.

A systematic biology tool was developed to prioritize cancer subtype-specific drugs by integrating genetic perturbation, drug action, biological pathway, and cancer subtype.
The capabilities of this tool include inferring patient-specific subpathway activity profiles in the context of gene expression profiles with subtype labels, calculating differentially
expressed subpathways based on cultured human cells treated with drugs in the 'cMap' (connectivity map) database, prioritizing cancer subtype specific drugs according to drug-disease
reverse association score based on subpathway, and visualization of results (Castelo (2013) <doi:10.1186/1471-2105-14-7>; Han et al (2019) <doi:10.1093/bioinformatics/btz894>; Lamb and Justin (2006) <doi:10.1126/science.1132939>). Please cite using <doi:10.1093/bioinformatics/btab011>.

Junwei Han

SubtypeDrug

Prioritization of Candidate Cancer Subtype Specific Drugs

isPackageLoaded function

<dl><dt>name</dt>
<dd>A string. The name of the R package which determines whether it is loaded.</dd></dl>

Arguments

Xudong Han,
Junwei Han,
Chonghui Liu

Author

SubtypeDrug internal function — isPackageLoaded

<dl>

<dt>name</dt>
<dd>A string. The name of the R package which determines whether it is loaded.</dd>

</dl>

isPackageLoaded: SubtypeDrug internal function

Description

Usage

Value

Arguments

Author

Details

Examples