SuperCell (version 1.0)

supercell_VlnPlot_single: Plot Violin plot for 1 feature

Description

Used for supercell_VlnPlot

Usage

supercell_VlnPlot_single(
  ge1,
  supercell_size = NULL,
  clusters,
  feature = NULL,
  color.use = NULL,
  pt.size = 0,
  pch = "o",
  y.max = NULL,
  y.min = NULL,
  adjust = 1,
  angle.text.y = 90,
  angle.text.x = 45
)

Arguments

ge1

a gene expression vector (same length as number of super-cells)

supercell_size

a vector with supercell size (ordered the same way as in ge)

clusters

a vector with clustering information (ordered the same way as in ge)

feature

gene to plot

color.use

colors for idents

pt.size

point size (0 by default)

pch

shape of jitter dots

y.max

max of y axis

y.min

min of y axis

adjust

param of geom_violin

angle.text.y

rotation of y text

angle.text.x

rotation of x text