supercell_mergeGE

This function merges independent SuperCell objects

Aggregates large single-cell data into metacell dataset by merging together gene expression of very similar cells. 'SuperCell' uses 'velocyto.R' <doi:10.1038/s41586-018-0414-6> <https://github.com/velocyto-team/velocyto.R> for RNA velocity. We also recommend installing 'scater' Bioconductor package <doi:10.18129/B9.bioc.scater> <https://bioconductor.org/packages/release/bioc/html/scater.html>.

Leonard Herault

SuperCell

Simplification of scRNA-Seq Data by Merging Together Similar
Cells

Mariia Bilous

supercell_mergeGE function

<dl><dt>SC.GEs</dt>
<dd>list of metacell gene expression matricies (result of supercell_GE ), make sure the order of the gene expression metricies is the same as in the call of supercell_merge</dd></dl>

Arguments

Merging metacell gene expression matrices from several independent SuperCell objects — supercell_mergeGE

<dl>

<dt>SC.GEs</dt>
<dd>list of metacell gene expression matricies (result of supercell_GE ), make sure the order of the gene expression metricies is the same as in the call of supercell_merge</dd>

</dl>

supercell_mergeGE: Merging metacell gene expression matrices from several independent SuperCell objects

Description

Usage

Value

Arguments

Examples