SwathXtend (version 1.0.0)

checkQuality: Checking for the integration quality of two libraries

Description

Checking for the integration quality of two libraries

Usage

checkQuality(datBaseLib, datExtLib, ...)

Arguments

datBaseLib

a data frame of the base library

datExtLib

a data frame of the add-on library

...

Additional parameters to pass in

Value

A list of quality indicators, including squared retention time (RT) correlation coefficient, root mean squared errors of RT residuals, and median of relative ion intensity correlation coefficient

Examples

libfiles <- paste(system.file("files",package="SwathXtend"),
   c("Lib2.txt","Lib3.txt"),sep="/")
datBaseLib <- readLibFile(libfiles[1])
datExtLib <- readLibFile(libfiles[2])
res <- checkQuality(datBaseLib, datExtLib)