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TANOVA (version 1.0.0)

Time Course Analysis of Variance for Microarray

Description

Functions for performing analysis of variance on time course microarray data

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Version

Install

install.packages('TANOVA')

Monthly Downloads

8

Version

1.0.0

License

LGPL

Maintainer

Weihong Xu

Last Published

October 29th, 2012

Functions in TANOVA (1.0.0)

F.stat.null

Generation of null F-statistics by bootstrap method
tanova

Classification of genes by time course analysis of variance(TANOVA)
F.stat

Compute F-statistics for ANOVA model
sigma.hat

Estimation of Covariance Matrix
prior.sigma

Compute the prior of covariance matrix
trigammaInverse

Trigamma Inverse Function
fdr.table

TANOVA False Discovery Table
group.ix

This is an internal function
z.score

Z Score
NANOVA.test

Non-parametric analysis of variance (NANOVA)
proj.dir

projection direction
sig.number

The number of significant genes in the FDR table at specified quantiles
data.form

Convert input data into appropriate format for TANOVA
ls.estimate

Least square estimation
proj.data

Projection of Raw Data
design.matrix

Generate design matrix for two-way factorial analysis