TCGAbiolinks (version 1.0.10)

TCGAvisualize_Heatmap: Heatmap with more sensible behavior using heatmap.plus

Description

Heatmap with more sensible behavior using heatmap.plus

Usage

TCGAvisualize_Heatmap(cancer, DFfilt, DFclin, DFsubt, data_Hc2, cbPalette, filename = NULL)

Arguments

cancer

tumor selected for the analysis

DFfilt

write

DFclin

write

DFsubt

write

data_Hc2

write

cbPalette

write

filename

write. default = NULL

Value

Heatmap plotted in pdf or png file.

Examples

query <- TCGAquery(tumor = "lgg")
## Not run: 
# # from case study n.2 LGG to test the function
# DFfilt <- datFilt
# DFclin = dataClin
# DFsubt = dataSubt
# data_Hc2 = data_Hc2
# TCGAvisualize_Heatmap(DFfilt,
# DFclin,
# DFsubt,
# data_Hc2)
# ## End(Not run)