get_case_lists

TCGA keeps track of which samples were analyzed by which technique within a 
given Study. Sample identifiers are organized in lists of cases (samples/patients) 
and are associated with a case_list identifier. The function retrieves information 
about the case lists available for a given TCGA Study.

The Cancer Genome Atlas (TCGA) is a program aimed at improving our understanding of Cancer Biology. Several TCGA Datasets are available online. 'TCGAretriever' helps accessing and downloading TCGA data hosted on 'cBioPortal' via its Web Interface (see <http://www.cbioportal.org/> for more information).

Damiano Fantini

TCGAretriever

Retrieve Genomic and Clinical Data from CBioPortal Including
TCGA Data

get_case_lists function

<dl><dt>csid</dt>
<dd>String corresponding to the Identifier of the TCGA Study of Interest</dd></dl>

Arguments

Damiano Fantini, <a href="/link/damiano.fantini%40gmail.com?package=TCGAretriever&version=1.7" data-mini-rdoc="TCGAretriever::damiano.fantini@gmail.com">damiano.fantini@gmail.com</a>

Author

Retrieve All Case List Available for a Specific TCGA Study — get_case_lists

<dl>

<dt>csid</dt>
<dd>String corresponding to the Identifier of the TCGA Study of Interest</dd>

</dl>

Damiano Fantini, <a href='mailto:damiano.fantini@gmail.com'>damiano.fantini@gmail.com</a>

get_case_lists: Retrieve All Case List Available for a Specific TCGA Study

Description

Usage

Value

Arguments

Author

References

Examples