TFBSTools


  TFBS includes a set of tools for transcription factor binding site detection and analysis as well as database interface functions for JASPAR, etc.


package

TFBSTools-package

TFBSTools is a package for the analysis and manipulation of
transcription factor binding sites. It includes matrices conversion
between Position Frequency Matirx (PFM),
Position Weight Matirx (PWM) and Information Content Matrix (ICM).
It can also scan putative TFBS from sequence/alignment,
query JASPAR database and provides a wrapper of
de novo motif discovery software.

Ge Tan

Software Package for Transcription Factor Binding Site (TFBS) Analysis

TFBSTools-package function

TFBS includes a set of tools for transcription factor binding site detection and analysis as well as database interface functions for JASPAR, etc.

TFBSTools-package: TFBS software package.

Description

Arguments