makeFlatFileDir


    A JASPAR object. Now it can be JASPAR2014 or JASPAR2016.


JASPAR


  On JASPAR web service, "FlatFileDir" includes all the *.pfm and a 
  matrix_list.txt file


TFBSTools is a package for the analysis and manipulation of
transcription factor binding sites. It includes matrices conversion
between Position Frequency Matirx (PFM),
Position Weight Matirx (PWM) and Information Content Matrix (ICM).
It can also scan putative TFBS from sequence/alignment,
query JASPAR database and provides a wrapper of
de novo motif discovery software.

Ge Tan

TFBSTools

Software Package for Transcription Factor Binding Site (TFBS) Analysis

makeFlatFileDir function

A JASPAR object. Now it can be JASPAR2014 or JASPAR2016.

On JASPAR web service, "FlatFileDir" includes all the *.pfm and a 
  matrix_list.txt file

makeFlatFileDir: Generate "FlatFileDir" directory

Description

Usage

Arguments

Value

Details

Examples