plot.tmbprofile

Output from <code><a rd-options="" href="/link/tmbprofile?package=TMB&version=1.7.15" data-mini-rdoc="TMB::tmbprofile">tmbprofile</a></code>.

type

Add horizontal and vertical lines depicting this confidence level (<code>NULL</code> disables the lines).

level

Plot (negative log) likelihood profile with confidence interval added.

With this tool, a user should be able to quickly implement
complex random effect models through simple C++ templates. The package combines
'CppAD' (C++ automatic differentiation), 'Eigen' (templated matrix-vector
library) and 'CHOLMOD' (sparse matrix routines available from R) to obtain
an efficient implementation of the applied Laplace approximation with exact
derivatives. Key features are: Automatic sparseness detection, parallelism
through 'BLAS' and parallel user templates.

Kasper Kristensen

Template Model Builder: A General Random Effect Tool Inspired by
'ADMB'

Brad Bell

Hans Skaug

Arni Magnusson

Casper Berg

Anders Nielsen

Martin Maechler

Theo Michelot

Mollie Brooks

Alex Forrence

Christoffer Moesgaard Albertsen

Cole Monnahan

plot.tmbprofile function

Output from <code><a rd-options='' href='tmbprofile'>tmbprofile</a></code>.

plot.tmbprofile: Plot likelihood profile.

Description

Usage

Arguments