sort_components

A list containing trained parameters of the Baysian GMM (see Value section in <code><a href="/link/vbgmm?package=TargetScore&version=1.10.0" rd-options="" data-mini-rdoc="TargetScore::vbgmm">vbgmm</a></code>).

model

Sort Gaussian mixture components with model paramters in increasing order of averaged means of d variables.

Infer the posterior distributions of microRNA targets by
probabilistically modelling the likelihood
microRNA-overexpression fold-changes and sequence-based scores.
Variaitonal Bayesian Gaussian mixture model (VB-GMM) is applied
to log fold-changes and sequence scores to obtain the
posteriors of latent variable being the miRNA targets. The
final targetScore is computed as the sigmoid-transformed
fold-change weighted by the averaged posteriors of target
components over all of the features.

Yue Li

TargetScore

TargetScore: Infer microRNA targets using
microRNA-overexpression data and sequence information

sort_components function

A list containing trained parameters of the Baysian GMM (see Value section in <code><a href="vbgmm" rd-options="">vbgmm</a></code>).

sort_components: Sort mixture components in increasing order of averaged means (Internal function)

Description

Usage

Arguments

Value

See Also

Examples