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TipDatingBeast (version 0.1-6)

Using Tip Dates with Phylogenetic Trees in BEAST

Description

Assist performing tip-dating of phylogenetic trees with BEAST.

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Version

Install

install.packages('TipDatingBeast')

Monthly Downloads

163

Version

0.1-6

License

GPL (>= 2)

Maintainer

Camilo Khatchikian

Last Published

July 29th, 2015

Functions in TipDatingBeast (0.1-6)

RandomCluster2

randomize dates among tips in the BEAST input file
TaxaOut

generates input files for leave-one-out analyses in BEAST
RandomDates

randomize dates among tips in the BEAST input file
Flu2.xml

Example BEAST 2 input file
clusters.Flu.csv

Cluster structure example input/output file for Beast 1
RandomCluster

randomize dates among tips in the BEAST input file
TipDatingBeast-package

Tip dating of phylogenetic trees with BEAST
clusters.Flu2.csv

Cluster structure example input/output file for Beast 2
Flu.xml

Example BEAST 1 input file
RandomDates2

randomize dates among tips in the BEAST input file
TaxonOut

single Taxon out input file for leave-one-out analysis in BEAST
ListTaxa

List taxa names present in the BEAST input file